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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914186.1_cds_XP_016464210.1_57268
CDS Infomation

[gene=LOC107787187] [db_xref=GeneID:107787187] [protein=pectin acetylesterase 5-like] [protein_id=XP_016464210.1] [location=join(49010..49217,49361..49443,49941..50067,50554..50633,50761..50850,51206..51330,52391..52451,53491..53544,53642..53719,53811..53916,54181..54326,55220..55327)] [gbkey=CDS]
Sequence

ATGGCGACTCATAGATTTTTTCAACCCATGAAATGGTGGCAAAAATTAACACGAAGAGAG
TGGACTATTGCAGCTGCCTCACTCTCTATTCTAATTTTTACTCTTACCTTCATTTCTCAC
TCTCACAGATTTTCTATTAATTCAACGCCCCCTGCCGACGATTTGGTACCCTTTACTCCT
TTAAGCAATGCCCAGAAAAAATCAGCTTTTTGTTTGGATGGAAGCGTACCTGGGTATCAT
TTGCAAAAGGGTTTTGGATCTGGGACTGATAAATGGGTTATTCTCGTTGAGGGCGGAGGC
TGGTGTAACTCAATAAAAACATGTTCTGTTCGCCAGACAACAAAATTGGGCTCTTCAAAG
TTCATGGAGCCTGATGTTTTTCATGGAATTTTGGGCTCTGACCCATCACTAAATCCGGAC
TTCTTTGAATGGAACAAAGTCAAGATACGCTATTGCGATGGTGGATCCTTTACTGGACAC
CCAGAGAGTGAATTTAAAAATGGAACGGGACTCTTCTTCAGAGGCCAGCTTATTTGGGAA
GCAATAATGAATGAACTTTTGTCATTAGGACTTTCTAATGCTAAACAGGCTCTTCTTTCG
GGGTGCTCGGCTGGAGGTCTGGCAACTCTCATACACTGTGATGATTTCCGAGAGATGTTA
CCCAAGGATGCCAATGTCAAGTGCCTTAGCGATGCAGGTTTTTTCCTCAATGAAAAGGAT
ATTGCTGGAATTCCCACCTTTGAGCGATTTTATGAAGATGTTGTTAACCTCCAGGGTGCG
GCAAAAAGTTTAAAGAAGGATTGCACATCAAGATTGGAACCTTATAAGTGTTTTTTCCCT
GAAGAATTTATAAGCAACATAAAGACCCCTGTTTTCCTTGTTAACCCGGGATATGATTTT
TGGCAAATACAAAACATCTTGATACCTGATTCATCGGATCCGCATGGAAGTTGGCTCAGA
TGCAAGCTAAATATCAGTAACTGTAATTCCAAGCAGCTTGAAGTCCTGGAAGATTTCCGG
AAGTCTTTGCTCAGAAAGCTCGAAGGATTTCAGCAAAATCCAGAAGGGGGCATGTTCATA
ATTTCTTGCTTTGCACATTGCCAGACATGGATGACTGGGACATGGCATGCTTCTTATTCT
CCAAAAATCAATAACAAAACAATTGCAGAGGCTGTAGGCGAGTGGTACTTCAACCGGAAA
GCTGCAAAATATATCGATTGTCCTTTTCCATGCAACCCTACTTGCTCTCATTTTTCCCCA
ACTTGA

Peptide Sequence

PEP ID

XP_016464210.1
PEP Infomation

PREDICTED: pectin acetylesterase 5-like [Nicotiana tabacum]
Sequence

MATHRFFQPMKWWQKLTRREWTIAAASLSILIFTLTFISHSHRFSINSTPPADDLVPFTP
LSNAQKKSAFCLDGSVPGYHLQKGFGSGTDKWVILVEGGGWCNSIKTCSVRQTTKLGSSK
FMEPDVFHGILGSDPSLNPDFFEWNKVKIRYCDGGSFTGHPESEFKNGTGLFFRGQLIWE
AIMNELLSLGLSNAKQALLSGCSAGGLATLIHCDDFREMLPKDANVKCLSDAGFFLNEKD
IAGIPTFERFYEDVVNLQGAAKSLKKDCTSRLEPYKCFFPEEFISNIKTPVFLVNPGYDF
WQIQNILIPDSSDPHGSWLRCKLNISNCNSKQLEVLEDFRKSLLRKLEGFQQNPEGGMFI
ISCFAHCQTWMTGTWHASYSPKINNKTIAEAVGEWYFNRKAAKYIDCPFPCNPTCSHFSP
T

Transcript Sequence

Gene sequence data has not been registered.